Large Scale Genomic Sequence Support Vector Machines

Posted in Science on August 19, 2008


Large Scale Genomic Sequence Support Vector Machines

Lecture slides:

  • Large Scale Genomic Sequence SVM Classifiers
  • Roadmap
  • Large Scale Problems
  • Formally
  • Support Vector Machine
  • Multiple Kernel Learning
  • Speeding up SVM training
  • Derivation I
  • Derivation II
  • Technical Remark
  • Algorithm
  • Parallelization
  • Multiple Kernel Learning
  • Roadmap
  • A Real World Large Scale Dataset
  • Biology: Detection of Splice Sites
  • Approach: Weighted Degree Kernel + SVM
  • Efficient computation via Suffix Tree
  • Results I
  • Results II
  • Conclusion

Author: Sören Sonnenburg, Fraunhofer First

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Tags: Science, Lectures, Computer Science, Machine Learning, VideoLectures.Net, Kernel Methods